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Multiple Sequence Alignment (MSA) is a fundamental technique in bioinformatics used to align three or more biological sequences, such as DNA, RNA, or proteins, simultaneously. The primary objective of MSA is to identify regions of similarity that may indicate functional, structural, or evolutionary relationships among the sequences. Unlike pairwise alignment, which compares only ______ _____ _____ _______ ______ _________ _______ ____.
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